Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015860053.1_cds_XP_016514522.1_26963
CDS Infomation

[gene=LOC107831279] [db_xref=GeneID:107831279] [protein=DEAD-box ATP-dependent RNA helicase 17-like isoform X3] [protein_id=XP_016514522.1] [location=complement(join(65248..65493,66288..66534,66878..67182,67316..67389,67473..67828,67915..68023,68842..68947,69322..69333))] [gbkey=CDS]
Sequence

ATGGTACTTTTGGTGTATGAGATCTTGCAAAAGTTGTTGCACCGTTTTCACTGGATTGTT
CCTGGCTATATTATGGGAGGGGAAAACAGGAACAAAGAGAAAGCAAGATTGCGAAAAGGT
ATATCTATTCTTGTTGCAACTCCTGGACGTCTTTTGGATCACCTAAAAAACACATCATCA
TTCTTGTACACGAACCTGCGCTGGATAATTTTTGATGAAGCAGACAGAATTCTGGAACTT
GGATATGGTAAAGAGATTGAAGATATACTTAATATTCTGGGCTCTAAACCACAGAAATCT
GCTGGCAAGGATAACACAACTTCACAGATTTCTGAGGTTCAGAGGCAAAATTTGCTGTTA
TCAGCTACATTAAATGAGAAAGTAAACGAGCTCGCTAAAATTAGTTTAGATAACCCAGTG
ATGGTTGGGCTTGACCAGAAAACAGAGCTACATTTAACTCAGCAAGACATGGAACCAATG
GAATTTAATGGGAAGGATATATTAGGAAAAGATGGCAAACTACTGAGTTCTTCAACTGAG
GAATATAAGCTTCCGACTCAGTTACTTCAGCGATATATAAAAGTTCCCTGTGGTTCTCGG
CTTGTAGTGCTTCTTGCAATTCTGAAACATCTGTTTGAGAAGGAGCCTTCCCAGAAGGTT
GTGGTGTTTTTTTCAACATGTGATGCTGTAGATTTTCATTACTCATTGGTGAGCGGATTT
CAGTTGCTCCCTCATCGGCAATCAGATATTGAAGACAAACAACTGTTTTTGAAATGCAAC
ACACTTCGGTTACATGGGAATATGAATCACGAGGACCGAAGAACTACATTCAATGCTTTT
AAAACAGAAAAATCAGCACTTCTGCTGTCCAGTGATGTTGCTGCTAGGGGCTTGGACTTT
CCAAAAGTTAGGTGTATTATACAGTATGATCCTCCAGGAGAGGCGACTGAATATGTGCAC
CGGGTAGGAAGAACTGCCCGCATAGGTGAAAAGGGCGATTCTTTATTGTTCCTACAGCCA
GTTGAAACTGATTACTTGCATGGCTTGGAGAAACATGGGGTGACTCTAACAGAGTATCCC
CTTCAGAAACTTTTGGATAGCTTTCCATTGTCTGGTATCAAGTACCACCCGAAGAATTTT
GTTTCAGTAGACACGCATCCATGGGTTGTTTCTCTACAGAGAGCATTGGAATCCTTTATT
TCATCAGAGCTAAAAATGAAGAAAATGGCACAAAATGCATTTTGCTCATGGGTTCGTGCA
TACACTGCCCATCGTGGTGAACTTAAAGGGATTTTTATGGTGAAGAAACTTCACTTGGGG
CATGTAGCAAGAAGTTTTGCATTGAAGGAACAACCATCTTTGGTTAATAAATCGCTCCAA
AAACAATCAAAGAAGAGGATGAGAGATCAGAAACATAACAACGTATCGAAAAAGAGGAAA
GTTTCTAAAAGATGA

Peptide Sequence

PEP ID

XP_016514522.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like isoform X3 [Nicotiana tabacum]
Sequence

MVLLVYEILQKLLHRFHWIVPGYIMGGENRNKEKARLRKGISILVATPGRLLDHLKNTSS
FLYTNLRWIIFDEADRILELGYGKEIEDILNILGSKPQKSAGKDNTTSQISEVQRQNLLL
SATLNEKVNELAKISLDNPVMVGLDQKTELHLTQQDMEPMEFNGKDILGKDGKLLSSSTE
EYKLPTQLLQRYIKVPCGSRLVVLLAILKHLFEKEPSQKVVVFFSTCDAVDFHYSLVSGF
QLLPHRQSDIEDKQLFLKCNTLRLHGNMNHEDRRTTFNAFKTEKSALLLSSDVAARGLDF
PKVRCIIQYDPPGEATEYVHRVGRTARIGEKGDSLLFLQPVETDYLHGLEKHGVTLTEYP
LQKLLDSFPLSGIKYHPKNFVSVDTHPWVVSLQRALESFISSELKMKKMAQNAFCSWVRA
YTAHRGELKGIFMVKKLHLGHVARSFALKEQPSLVNKSLQKQSKKRMRDQKHNNVSKKRK
VSKR

Transcript Sequence

Gene sequence data has not been registered.